welcome: please sign in

Upload page content

You can upload content for the page named below. If you change the page name, you can also upload content for another page. If the page name is empty, we derive the page name from the file name.

File to load page content from
Page name
Comment
What is the Admin password?

Revision 28 as of 2013-10-23 07:11:15

location: User's guide

BDF User's guide

Insert introduction of BDF module at here.

How to run BDF

To run BDF, you can write a shell script named "run.sh" with following content,

 #!/bin/bash
 # specify BDF home directory
 export BDFHOME=~/work/0.5.dev
 # specify BDF scratch  directory
 export BDF_TMPDIR=/scratch/bbs/$RANDOM

 if [ -e $BDF_TMPDIR ]; then
    echo "Temperory directory " $BDF_TMPDIR "exist! STOP!"
 else
    mkdir $BDF_TMPDIR
 fi

 # run BDF driver with input file $1
 $BDFHOME/sbin/bdfdrv.py -r $1

 ls -l $BDF_TMPDIR
 rm -rf $BDF_TMPDIR

For example, you can copy the file named "$BDFHOME/Tests/input/test002.inp" to a work directory. Then, you write done the shell script and store it in you work directory. To evoke BDF calculation, you just use command

$./run.sh test001.inp 

The output will print on standard output. Thus, it is better to redirect output by,

$./run.sh test001.inp > test001.out

Some tips to run BDF

 1. There are a lot of testing inputs saved in directory of $BDFHOME/Tests/input.
 2. BDF driver assume input file has the name *.inp. Thus, you can run BDF with command
    $./run.sh test001
 3. If BDF is compiled with OpenMP supporting, you can can set OpenMP environmental variables in running script. For example,
    export OMP_NUM_THREADS=4
    export OMP_STACKSIZE=1024M

BDF Flowchat

Input style

BDF modules

compass

drt - Generate DRTs in GUGA.

grad - Gradient.

mcscf - Multi-configrational self-consistent-field program

mp2 - MP2 program

mrci - Multi-reference configuration interaction program.

local - Localization of molecule orbital.

scf - Self-consistent-field program

tddft

vgmfci

xuanyuan - 1e and 2e integrals program.

genfrag - Generate or optimize fragments and fragments pairs in Local orbital based Frag-MP2/CCSD.