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Module genfrag is used to generate molecular fragments and also fragment pairs that are used in Frag-MP2/CCSD calculation.
General keywords
optfrag
- Ask for fragment optimization. Next line is a string "all" or a list of fragments need to be optimized.
decfrag
- Fragments in DEC-(divide-expend-consolidate) MP2/CCSD proposed by Paul Jogensen et. al. are generated. If this keyword is not used in input. FragMP2 fragments will be generated.
threshrad
- For Frag-MP2, the following line is a float number to specify threshold of buffer radii in FragMP2. Default: 4.5 angstrom. For DEC-MP2, the following line is three float numbers to specify thresholds of virtual EOS space, occupied buffer space and unoccupied buffer space. Default: 4.5 3.0 1.5 angstrom. If fragment optimization is required, these threshold are used as initial thresholds.
threshtail
- The following line is two float numbers to define threshold of Coulomb tails of occupied and virtual orbitals. Default: 0.01 0.01.
threshextvir
- Threshold of extra virtual orbital in Frag-MP2/CCSD approach. Large value will add more extra virtual orbital in amplitude space. Default: 0.1.
distpair
- Threshold of distance pairs. Two fragment with distance larger than "dispair" will be neglect in correlation energy calculation. Default: 15 angstrom.
energy
- Set the method will be used in correlation calculation. Now, we only support MP2.
Expert keywords
noenergy
- Do not evoke energy calculation automatically.
fragpair
- Only generate fragment pairs. All punch files of fragments should be generated previously and saved in BDF_WORKDIR.
nopair
- Do not calculate interaction energy of between the fragment pairs.